Research Output

2020

A framework for using learning theories to inform ‘growth mindset’ activities

Campbell, A., Craig, T. & Collier-Reed, B., 2 Jan 2020, In : International Journal of Mathematical Education in Science and Technology. 51, 1, p. 26-43 18 p.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)
1 Downloads (Pure)

A Partially-Learned Algorithm for Joint Photo-acoustic Reconstruction and Segmentation

Boink, Y. E., Manohar, S. & Brune, C., 1 Jan 2020, In : IEEE transactions on medical imaging. 39, 1, p. 129-139 11 p., 8734097.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Deep learning of circulating tumour cells

Zeune, L. L., Boink, Y. E., van Dalum, G., Nanou, A., de Wit, S., Andree, K. C., Swennenhuis, J. F., van Gils, S. A., Terstappen, L. W. M. M. & Brune, C., 10 Feb 2020, In : Nature Machine Intelligence. 2, p. 124-133 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Pathological responses to single pulse electrical stimuli in epilepsy: the role of feedforward inhibition

Hebbink, J., Huiskamp, G. J. M., van Gils, S. A., Leijten, F. S. S. & Meijer, H. G. E., 1 Feb 2020, In : European journal of neuroscience. 51, 4, p. 1122-1136 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
77 Downloads (Pure)
2019

A Comparison of Evoked and Non-evoked Functional Networks

Hebbink, J., van Blooijs, D., Huiskamp, G., Leijten, F. S. S., van Gils, S. A. & Meijer, H. G. E., 30 May 2019, In : Brain topography. 32, 3, p. 405-417 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
6 Citations (Scopus)
47 Downloads (Pure)

Automated CTC Classification, Enumeration and Pheno Typing: Where Math meets Biology

Zeune, L. L., 14 Feb 2019, Enschede: University of Twente. 207 p.

Research output: ThesisPhD Thesis - Research UT, graduation UT

Open Access
File
325 Downloads (Pure)

Computational Modelling and Electrical Stimulation for Epilepsy Surgery

Hebbink, J., 2019, Enschede: University of Twente. 148 p.

Research output: ThesisPhD Thesis - Research UT, graduation UT

Open Access
File
111 Downloads (Pure)

Directional sinogram inpainting for limited angle tomography

Tovey, R., Benning, M., Brune, C., Lagerwerf, M. J., Collins, S. M., Leary, R. K., Midgley, P. A. & Schönlieb, C. B., 1 Feb 2019, In : Inverse problems. 35, 2, 29 p., 024004.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
4 Citations (Scopus)
35 Downloads (Pure)

Homoclinic saddle to saddle-focus transitions in 4D systems

Kalia, M., Kouznetsov, I. A. & Meijer, H. G. E., Jun 2019, In : Nonlinearity. 32, 6, p. 2024-2054 31 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
36 Downloads (Pure)

Numerical Bifurcation Analysis of Maps: From Theory to Software

Kouznetsov, I. A. & Meijer, H. G. E., Mar 2019, Cambridge, UK: Cambridge University Press. 420 p. (Cambridge Monographs on Applied and Computational Mathematics; vol. 34)

Research output: Book/ReportBookAcademic

Robustness of a partially learned photoacoustic reconstruction algorithm

Boink, Y. E., Brune, C. & Manohar, S., 6 Mar 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Wang, L. V. & Oraevsky, A. A. (eds.). Bellingham, WA: SPIE, Vol. 10878. 7 p. 108781D. (Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
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19 Downloads (Pure)

The energy deprived tripartite synapse: a biophysical model

Kalia, M., Meijer, H. G. E., van Putten, M. J. A. M., Rose, C. R. & van Gils, S. A., 2019, (Unpublished). 1 p.

Research output: Contribution to conferencePoster

File
22 Downloads (Pure)

The Twente educational model in theory and practice: two modules as exemplars

Craig, T. S., Nov 2019, Swan Delta 2019 Proceedings: The 12th Delta Conference on the teaching and learning of undergraduate mathematics and statistics: reflections of change proceedings. Pettigrew, J., Rylands, L., Shearman, D. & Yeung, A. (eds.). Sydney: Western Sydney University, p. 19 - 28 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
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8 Downloads (Pure)
2018

A framework for directional and higher-order reconstruction in photoacoustic tomography

Boink, Y. E., Lagerwerf, M. J., Steenbergen, W., van Gils, S. A., Manohar, S. & Brune, C., 16 Feb 2018, In : Physics in medicine and biology. 63, 4, 045018.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
9 Citations (Scopus)
135 Downloads (Pure)

Circulating tumor cells, tumor-derived extracellular vesicles and plasma cytokeratins in castration-resistant prostate cancer patients

Nanou, A., Coumans, F. A. W., Dalum, G. V., Zeune, L. L., Dolling, D., Onstenk, W., Crespo, M., Fontes, M. S., Rescigno, P., Fowler, G., Flohr, P., Brune, C., Sleijfer, S., de Bono, J. S. & Terstappen, L. W. M. M., 10 Apr 2018, In : Oncotarget. 9, 27, p. 19283-19293 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
20 Citations (Scopus)
33 Downloads (Pure)

Classification of cell populations in CTC enriched samples by advanced image analysis

de Wit, S., Zeune, L. L., Brune, C., van Dalum, G., Hiltermann, T. J. N., Groen, H. J. M. & Terstappen, L. W. M. M., 17 Apr 2018.

Research output: Contribution to conferencePoster

Open Access
File
35 Downloads (Pure)

Deep learning to identify circulating tumor cells by ACCEPT

Zeune, L. L., van Dalum, G., Nanou, A., Mutter-de Wit, S., Andree, K. C., Swennenhuis, J. F., Terstappen, L. W. M. M. & Brune, C., 6 Jul 2018, p. 192-193. 2 p.

Research output: Contribution to conferenceAbstract

2 Downloads (Pure)

Evoked directional network characteristics of epileptogenic tissue derived from single pulse electrical stimulation

van Blooijs, D., Leijten, F. S. S., van Rijen, P. C., Meijer, H. G. E. & Huiskamp, G. J. M., Nov 2018, In : Human brain mapping. 39, 11, p. 4611-4622 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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4 Citations (Scopus)
34 Downloads (Pure)

Hamiltonian Boussinesq simulations for waves entering a harbor with access channel

Kurnia, R., Badriana, M. R. & van Groesen, E., 1 Mar 2018, In : Journal of waterway, port, coastal, and ocean engineering. 144, 2, 04017047.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)
30 Downloads (Pure)

How to Agree on a CTC: Evaluating the Consensus in Circulating Tumor Cell Scoring

Zeune, L. L., de Wit, S., Berghuis, A. M. S., IJzerman, M. J., Terstappen, L. W. M. M. & Brune, C., 24 Sep 2018, In : Cytometry. Part A. 93, 12, p. 1202-1206 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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12 Citations (Scopus)
116 Downloads (Pure)

Machine learning for the analysis of single pulse stimulation in electrocorticography

D’Angremont, E., Huiskamp, G. J., Leijten, F. S., Brune, C. & van Putten, M. J., 10 May 2018, p. e125.

Research output: Contribution to conferenceAbstract

Open Access
File
25 Downloads (Pure)

Mechanisms of vascular endothelial growth factor inhibition induced hypertension

Maki-petaja, K., Mcgeoch, A., Yang, L., Hubsch, A., Mceniery, C., Mir, F., Gajendragadkar, P., Ramenatte, N., Anandappa, G., Brune, C., Boink, Y., Bibiane-Schönlieb, C., Meyer, P., Bond, S., Wilkinson, I., Jodrell, D. & Cheriyan, J., 1 Dec 2018, p. 87-88. 2 p.

Research output: Contribution to conferenceAbstract

Numerical bifurcation analysis of double +1 multiplier in ℤ3-symmetric maps

Mazrooei-Sebdani, R., Eskandari, Z. & Meijer, H. G. E., 2 Sep 2018, In : Journal of difference equations and applications. 24, 9, p. 1402-1413

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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40 Downloads (Pure)

Numerical Bifurcation Analysis of Homoclinic Orbits Embedded in One-Dimensional Manifolds of Maps

Neirynck, N., Govaerts, W., Kouznetsov, I. A. & Meijer, H. G. E., Apr 2018, In : ACM transactions on mathematical software. 44, 3, 25.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)
2 Downloads (Pure)

Risk estimators for choosing regularization parameters in ill-posed problems: Properties and limitations

Lucka, F., Proksch, K., Brune, C., Bissantz, N., Burger, M., Dette, H. & Wübbeling, F., 1 Jan 2018, In : Inverse Problems and Imaging. 12, 5, p. 1121-1155 35 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)

Sensitivity of a partially learned model-based reconstruction algorithm

Boink, Y. E., Van Gils, S. A., Manohar, S. & Brune, C., 17 Dec 2018, 89th Annual Meeting of the International Association of Applied Mathematics and Mechanics (GAMM). 1 ed. Vol. 18. 2 p. (Proceedings in Applied Mathematics and Mechanics).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

Open Access
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28 Downloads (Pure)

Spectral AB simulations for coastal and ocean engineering applications

Kurnia, R., Turnip, P. & van Groesen, E., 31 Dec 2018, Proceedings of the Fourth International Conference in Ocean Engineering (ICOE2018). Murali, K., Sriram, V., Samad, A. & Saha, N. (eds.). Singapore: Springer, Vol. 2. p. 207-217 11 p. (Lecture Notes in Civil Engineering; vol. 23).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Variational Boussinesq model for strongly nonlinear dispersive waves

Lawrence, C., Adytia, D. & van Groesen, E., 1 Jan 2018, In : Wave motion. 76, p. 78-102 25 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)
2017

A Rate-Reduced Neuron Model for Complex Spiking Behavior

Dijkstra, K., Kouznetsov, Y. A., van Putten, M. J. A. M. & van Gils, S. A., 11 Dec 2017, In : Journal of mathematical neuroscience. 7, 18 p., 13.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
1 Citation (Scopus)
58 Downloads (Pure)

A Space-Time Finite Element Method for Neural Field Equations with Transmission Delays

Polner, M., van der Vegt, J. J. W. & van Gils, S. A., 21 Dec 2017, In : SIAM journal on scientific computing. 39, 5, p. B797–B818

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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12 Downloads (Pure)

Automated identification of circulating tumor cells by image analysis

Zeune, L. L., Dalum, G. V., Bidard, F-C., Pierga, J-Y., Fehm, T., Neubauer, H., Rack, B., Alunni-fabbroni, M., Crespo, M., de Bono, J., Terstappen, L. W. M. M. & Brune, C., 1 Jul 2017, p. 1733-1733.

Research output: Contribution to conferenceAbstract

Avoiding Internal Capsule Stimulation With a New Eight-Channel Steering Deep Brain Stimulation Lead

van Dijk, K. J., Verhagen, R., Bour, L. J., Heida, C. & Veltink, P. H., 15 Oct 2017, In : Neuromodulation. 21, 6, p. 553-561 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)
2 Downloads (Pure)

Combining contrast invariant L1 data fidelities with nonlinear spectral image decomposition

Zeune, L., van Gils, S. A., Terstappen, L. & Brune, C., 18 May 2017, Scale Space and Variational Methods in Computer Vision - 6th International Conference, SSVM 2017, Proceedings. Springer, Vol. 10302 LNCS. p. 80-93 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10302 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

Cross-scale effects of neural interactions during human neocortical seizure activity

Eissa, T. L., Dijkstra, K., Brune, C., Emerson, R. G., van Putten, M. J. A. M., Goodman, R. R., McKhann Jr., G. M., Schevon, C. A., van Drongelen, W. & van Gils, S. A., 3 Oct 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 40, p. 10761-10766

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
15 Citations (Scopus)
43 Downloads (Pure)

Design of a Magnetic Resonance-Safe Haptic Wrist Manipulator for Movement Disorder Diagnostics

Bode, D., Mugge, W., Schouten, A. C., van Rootselaar, A-F., Bour, L. J., van der Helm, F. C. T. & Lammertse, P., Dec 2017, In : Journal of medical devices. 11, 4, MED-16-1356.

Research output: Contribution to journalArticleAcademicpeer-review

Freak Wave Formation from Phase Coherence

Latifah, A. L. & van Groesen, E., 11 Apr 2017, In : Journal of physics: Conference series. 822, 1, 012067.

Research output: Contribution to journalConference articleAcademicpeer-review

Open Access
File
54 Downloads (Pure)

From Single Cell to Neural Field - Dynamics on Different Scales

Dijkstra, K., 24 Mar 2017, Enschede: Koen Dijkstra. 124 p.

Research output: ThesisPhD Thesis - Research UT, graduation UT

Open Access
File
82 Downloads (Pure)

Hamiltonian Boussinesq formulation of wave–ship interactions

van Groesen, E. W. C. & Andonowati, A., Feb 2017, In : Applied mathematical modelling. 42, p. 133-144 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

High waves in Draupner seas — Part 1: numerical simulations and characterization of the seas

van Groesen, E., Turnip, P. & Kurnia, R., 1 Aug 2017, In : Journal of Ocean Engineering and Marine Energy. 3, 3, p. 233-245 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
8 Citations (Scopus)
58 Downloads (Pure)

High waves in Draupner seas — Part 2: Observation and prediction from synthetic radar images

van Groesen, E. & Wijaya, A. P., 18 Nov 2017, In : Journal of Ocean Engineering and Marine Energy. 3, p. 1-8 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
8 Citations (Scopus)
69 Downloads (Pure)

Localization for spatial–spectral implementations of 1D Analytic Boussinesq equations

Kurnia, R. & van Groesen, E., 1 Jul 2017, In : Wave motion. 72, p. 113-132 20 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)

Multiscale Segmentation via Bregman Distances and Nonlinear Spectral Analysis

Zeune, L. L., van Dalum, G., Terstappen, L. W. M. M., van Gils, S. A. & Brune, C., 8 Feb 2017, In : SIAM journal on imaging sciences. 10, 1, p. 111-146 36 p.

Research output: Contribution to journalArticleAcademicpeer-review

15 Citations (Scopus)
27 Downloads (Pure)

Numerical Bifurcation Analysis of Double +1 Multiplier in Z3-Symmetric Maps

Mazrooei-Sebdani, R., Eskandari, Z. & Meijer, H. G. E., Feb 2017, Enschede: University of Twente, Department of Applied Mathematics. 14 p. (Memorandum / Department of Applied Mathematics; no. 2058)

Research output: Book/ReportReportOther research output

File
68 Downloads (Pure)

Phenomenological network models: Lessons for epilepsy surgery

Hebbink, J., Meijer, H., Huiskamp, G., van Gils, S. A. & Leijten, F., 4 Oct 2017, In : Epilepsia. 58, 10, p. e147-e151 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
10 Citations (Scopus)
61 Downloads (Pure)

Quantifying HER-2 expression on Circulating Tumor Cells by ACCEPT

Zeune, L. L., van Dalum, G., Decraene, C., Proudhon, C., Fehm, T., Neubauer, H., Rack, B., Alunni-fabbroni, M., Terstappen, L. W. M. M., van Gils, S. A. & Brune, C., 30 Oct 2017, In : PLoS ONE. 12, 10, 12 p., e0186562.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
13 Citations (Scopus)
52 Downloads (Pure)

Reconstruction and deterministic prediction of ocean waves from synthetic radar images

Wijaya, A. P., 6 Jul 2017, Enschede: University of Twente. 89 p.

Research output: ThesisPhD Thesis - Research UT, graduation UT

Open Access
File
94 Downloads (Pure)

Risk Estimators for Choosing Regularization Parameters in Ill-Posed Problems - Properties and Limitations

Lucka, F., Proksch, K., Brune, C., Bissantz, N., Burger, M., Dette, H. & Wübbeling, F., 18 Jan 2017, (Submitted) arXiv.org, p. 1-38.

Research output: Working paper

File
68 Downloads (Pure)

Sparse pallidal connections shape synchrony in a network model of the basal ganglia

Schwab, B. C., van Wezel, R. J. A. & van Gils, S. A., 1 Apr 2017, In : European journal of neuroscience. 45, 8, p. 1000-1012 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)
2 Downloads (Pure)

Synaptic damage underlies EEG abnormalities in postanoxic encephalopathy: A computational study

Ruijter, B. J., Hofmeijer, J., Meijer, H. G. E. & van Putten, M. J. A. M., 2017, In : Clinical neurophysiology. 128, 9, p. 1682 1695 p.

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)