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2020

A framework for using learning theories to inform ‘growth mindset’ activities

Campbell, A., Craig, T. & Collier-Reed, B., 2 Jan 2020, In : International Journal of Mathematical Education in Science and Technology. 51, 1, p. 26-43 18 p.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)
1 Downloads (Pure)

A Partially-Learned Algorithm for Joint Photo-acoustic Reconstruction and Segmentation

Boink, Y. E., Manohar, S. & Brune, C., 1 Jan 2020, In : IEEE transactions on medical imaging. 39, 1, p. 129-139 11 p., 8734097.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Deep learning of circulating tumour cells

Zeune, L. L., Boink, Y. E., van Dalum, G., Nanou, A., de Wit, S., Andree, K. C., Swennenhuis, J. F., van Gils, S. A., Terstappen, L. W. M. M. & Brune, C., 10 Feb 2020, In : Nature Machine Intelligence. 2, p. 124-133 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Pathological responses to single pulse electrical stimuli in epilepsy: the role of feedforward inhibition

Hebbink, J., Huiskamp, G. J. M., van Gils, S. A., Leijten, F. S. S. & Meijer, H. G. E., 1 Feb 2020, In : European journal of neuroscience. 51, 4, p. 1122-1136 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

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1 Citation (Scopus)
77 Downloads (Pure)
2019

A Comparison of Evoked and Non-evoked Functional Networks

Hebbink, J., van Blooijs, D., Huiskamp, G., Leijten, F. S. S., van Gils, S. A. & Meijer, H. G. E., 30 May 2019, In : Brain topography. 32, 3, p. 405-417 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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6 Citations (Scopus)
47 Downloads (Pure)

Directional sinogram inpainting for limited angle tomography

Tovey, R., Benning, M., Brune, C., Lagerwerf, M. J., Collins, S. M., Leary, R. K., Midgley, P. A. & Schönlieb, C. B., 1 Feb 2019, In : Inverse problems. 35, 2, 29 p., 024004.

Research output: Contribution to journalArticleAcademicpeer-review

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4 Citations (Scopus)
35 Downloads (Pure)

Homoclinic saddle to saddle-focus transitions in 4D systems

Kalia, M., Kouznetsov, I. A. & Meijer, H. G. E., Jun 2019, In : Nonlinearity. 32, 6, p. 2024-2054 31 p.

Research output: Contribution to journalArticleAcademicpeer-review

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36 Downloads (Pure)
2018

A framework for directional and higher-order reconstruction in photoacoustic tomography

Boink, Y. E., Lagerwerf, M. J., Steenbergen, W., van Gils, S. A., Manohar, S. & Brune, C., 16 Feb 2018, In : Physics in medicine and biology. 63, 4, 045018.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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9 Citations (Scopus)
135 Downloads (Pure)

Circulating tumor cells, tumor-derived extracellular vesicles and plasma cytokeratins in castration-resistant prostate cancer patients

Nanou, A., Coumans, F. A. W., Dalum, G. V., Zeune, L. L., Dolling, D., Onstenk, W., Crespo, M., Fontes, M. S., Rescigno, P., Fowler, G., Flohr, P., Brune, C., Sleijfer, S., de Bono, J. S. & Terstappen, L. W. M. M., 10 Apr 2018, In : Oncotarget. 9, 27, p. 19283-19293 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

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20 Citations (Scopus)
33 Downloads (Pure)

Evoked directional network characteristics of epileptogenic tissue derived from single pulse electrical stimulation

van Blooijs, D., Leijten, F. S. S., van Rijen, P. C., Meijer, H. G. E. & Huiskamp, G. J. M., Nov 2018, In : Human brain mapping. 39, 11, p. 4611-4622 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

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4 Citations (Scopus)
34 Downloads (Pure)

Hamiltonian Boussinesq simulations for waves entering a harbor with access channel

Kurnia, R., Badriana, M. R. & van Groesen, E., 1 Mar 2018, In : Journal of waterway, port, coastal, and ocean engineering. 144, 2, 04017047.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)
30 Downloads (Pure)

How to Agree on a CTC: Evaluating the Consensus in Circulating Tumor Cell Scoring

Zeune, L. L., de Wit, S., Berghuis, A. M. S., IJzerman, M. J., Terstappen, L. W. M. M. & Brune, C., 24 Sep 2018, In : Cytometry. Part A. 93, 12, p. 1202-1206 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

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12 Citations (Scopus)
116 Downloads (Pure)

Numerical bifurcation analysis of double +1 multiplier in ℤ3-symmetric maps

Mazrooei-Sebdani, R., Eskandari, Z. & Meijer, H. G. E., 2 Sep 2018, In : Journal of difference equations and applications. 24, 9, p. 1402-1413

Research output: Contribution to journalArticleAcademicpeer-review

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40 Downloads (Pure)

Numerical Bifurcation Analysis of Homoclinic Orbits Embedded in One-Dimensional Manifolds of Maps

Neirynck, N., Govaerts, W., Kouznetsov, I. A. & Meijer, H. G. E., Apr 2018, In : ACM transactions on mathematical software. 44, 3, 25.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)
2 Downloads (Pure)

Risk estimators for choosing regularization parameters in ill-posed problems: Properties and limitations

Lucka, F., Proksch, K., Brune, C., Bissantz, N., Burger, M., Dette, H. & Wübbeling, F., 1 Jan 2018, In : Inverse Problems and Imaging. 12, 5, p. 1121-1155 35 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)

Variational Boussinesq model for strongly nonlinear dispersive waves

Lawrence, C., Adytia, D. & van Groesen, E., 1 Jan 2018, In : Wave motion. 76, p. 78-102 25 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)
2017

A Rate-Reduced Neuron Model for Complex Spiking Behavior

Dijkstra, K., Kouznetsov, Y. A., van Putten, M. J. A. M. & van Gils, S. A., 11 Dec 2017, In : Journal of mathematical neuroscience. 7, 18 p., 13.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
58 Downloads (Pure)

A Space-Time Finite Element Method for Neural Field Equations with Transmission Delays

Polner, M., van der Vegt, J. J. W. & van Gils, S. A., 21 Dec 2017, In : SIAM journal on scientific computing. 39, 5, p. B797–B818

Research output: Contribution to journalArticleAcademicpeer-review

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Avoiding Internal Capsule Stimulation With a New Eight-Channel Steering Deep Brain Stimulation Lead

van Dijk, K. J., Verhagen, R., Bour, L. J., Heida, C. & Veltink, P. H., 15 Oct 2017, In : Neuromodulation. 21, 6, p. 553-561 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)
2 Downloads (Pure)

Cross-scale effects of neural interactions during human neocortical seizure activity

Eissa, T. L., Dijkstra, K., Brune, C., Emerson, R. G., van Putten, M. J. A. M., Goodman, R. R., McKhann Jr., G. M., Schevon, C. A., van Drongelen, W. & van Gils, S. A., 3 Oct 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 40, p. 10761-10766

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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15 Citations (Scopus)
43 Downloads (Pure)

Design of a Magnetic Resonance-Safe Haptic Wrist Manipulator for Movement Disorder Diagnostics

Bode, D., Mugge, W., Schouten, A. C., van Rootselaar, A-F., Bour, L. J., van der Helm, F. C. T. & Lammertse, P., Dec 2017, In : Journal of medical devices. 11, 4, MED-16-1356.

Research output: Contribution to journalArticleAcademicpeer-review

Hamiltonian Boussinesq formulation of wave–ship interactions

van Groesen, E. W. C. & Andonowati, A., Feb 2017, In : Applied mathematical modelling. 42, p. 133-144 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

High waves in Draupner seas — Part 1: numerical simulations and characterization of the seas

van Groesen, E., Turnip, P. & Kurnia, R., 1 Aug 2017, In : Journal of Ocean Engineering and Marine Energy. 3, 3, p. 233-245 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

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8 Citations (Scopus)
58 Downloads (Pure)

High waves in Draupner seas — Part 2: Observation and prediction from synthetic radar images

van Groesen, E. & Wijaya, A. P., 18 Nov 2017, In : Journal of Ocean Engineering and Marine Energy. 3, p. 1-8 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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8 Citations (Scopus)
69 Downloads (Pure)

Localization for spatial–spectral implementations of 1D Analytic Boussinesq equations

Kurnia, R. & van Groesen, E., 1 Jul 2017, In : Wave motion. 72, p. 113-132 20 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)

Multiscale Segmentation via Bregman Distances and Nonlinear Spectral Analysis

Zeune, L. L., van Dalum, G., Terstappen, L. W. M. M., van Gils, S. A. & Brune, C., 8 Feb 2017, In : SIAM journal on imaging sciences. 10, 1, p. 111-146 36 p.

Research output: Contribution to journalArticleAcademicpeer-review

15 Citations (Scopus)
27 Downloads (Pure)

Phenomenological network models: Lessons for epilepsy surgery

Hebbink, J., Meijer, H., Huiskamp, G., van Gils, S. A. & Leijten, F., 4 Oct 2017, In : Epilepsia. 58, 10, p. e147-e151 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

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10 Citations (Scopus)
61 Downloads (Pure)

Quantifying HER-2 expression on Circulating Tumor Cells by ACCEPT

Zeune, L. L., van Dalum, G., Decraene, C., Proudhon, C., Fehm, T., Neubauer, H., Rack, B., Alunni-fabbroni, M., Terstappen, L. W. M. M., van Gils, S. A. & Brune, C., 30 Oct 2017, In : PLoS ONE. 12, 10, 12 p., e0186562.

Research output: Contribution to journalArticleAcademicpeer-review

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13 Citations (Scopus)
52 Downloads (Pure)

Sparse pallidal connections shape synchrony in a network model of the basal ganglia

Schwab, B. C., van Wezel, R. J. A. & van Gils, S. A., 1 Apr 2017, In : European journal of neuroscience. 45, 8, p. 1000-1012 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)
2 Downloads (Pure)

Synaptic damage underlies EEG abnormalities in postanoxic encephalopathy: A computational study

Ruijter, B. J., Hofmeijer, J., Meijer, H. G. E. & van Putten, M. J. A. M., 2017, In : Clinical neurophysiology. 128, 9, p. 1682 1695 p.

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)
2016

A 4D CT digital phantom of an individual human brain for perfusion analysis

Manniesing, R., Brune, C., van Ginneken, B. & Prokop, M., 30 Nov 2016, In : PeerJ. 4, e2683, p. 1-19 19 p.

Research output: Contribution to journalArticleAcademicpeer-review

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52 Downloads (Pure)

A Biophysical Model for Cytotoxic Cell Swelling

Dijkstra, K., Hofmeijer, J., van Gils, S. A. & van Putten, M. J. A. M., 23 Nov 2016, In : Journal of neuroscience. 36, 47, p. 11881-11890 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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13 Citations (Scopus)
59 Downloads (Pure)
Open Access
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1 Citation (Scopus)
42 Downloads (Pure)

Determination of the significant wave height from shadowing in synthetic radar images

Wijaya, A. P. & van Groesen, E. W. C., 1 Mar 2016, In : Ocean engineering. 114, p. 204-215 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

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9 Citations (Scopus)
107 Downloads (Pure)
Open Access
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1 Citation (Scopus)
54 Downloads (Pure)

Initialization of Homoclinic Solutions near Bogdanov-Takens Points: Lindstedt-Poincaré Compared with Regular Perturbation Method

Al Hdaibat, B., Govaerts, W., Kouznetsov, I. A. & Meijer, H. G. E., 17 May 2016, In : SIAM journal on applied dynamical systems. 15, 2, p. 952-980 29 p.

Research output: Contribution to journalArticleAcademicpeer-review

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10 Citations (Scopus)
21 Downloads (Pure)

Localized coherence of freak waves

Latifah, A. L. & Van Groesen, E., 16 Sep 2016, In : Nonlinear processes in geophysics. 23, 5, p. 341-359 19 p.

Research output: Contribution to journalArticleAcademicpeer-review

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1 Citation (Scopus)
53 Downloads (Pure)

Pneumatic Distension of Ventricular Mural Architecture Validated Histologically

Burg, M., Lunkenheimer, P., Niederer, P., Brune, C., Redmann, K., Smerup, M., Spiegel, U., Becker, F., Maintz, D., Heindel, W. & Anderson, R. H., 11 Sep 2016, In : RöFo : Fortschritte auf dem Gebiet der Röntgenstrahlen und der bildgebenden Verfahren. 188, 11, p. 1045-1053 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
49 Downloads (Pure)

Single Pulse Electrical Stimulation to identify epileptogenic cortex: Clinical information obtained from early evoked responses

Mouthaan, B. E., van 't Klooster, M. A., Keizer, D., Hebbink, G. J., Leijten, F. S. S., Ferrier, C. H., van Putten, M. J. A. M., Zijlmans, M. & Huiskamp, G. J. M., Feb 2016, In : Clinical neurophysiology. 127, 2, p. 1088-1098 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

22 Citations (Scopus)
2015

Accurate Approximation of Homoclinic Solutions in Gray-Scott Kinetic Model

Kouznetsov, I. A., Meijer, H. G. E., Al Hdaibat, B. & Govaerts, W., Aug 2015, In : International journal of bifurcation and chaos in applied sciences and engineering. 25, 9, p. 1550125 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)
1 Downloads (Pure)

Automated design of programmable enzyme-driven DNA circuits

van Roekel, H. W. H., Meijer, L. H. H., Masroor, S., Félix Garza, Z. C., Estévez-Torres, A., Rondelez, Y., Zagaris, A., Peletier, M. A., Hilbers, P. A. J. & de Greef, T. F. A., 19 Jun 2015, In : ACS synthetic biology. 4, 6, p. 735-745 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

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12 Citations (Scopus)
34 Downloads (Pure)

Computational modeling of Adelta-fiber-mediated nociceptive detection of electrocutaneous stimulation

Yang, H., Meijer, H. G. E., Doll, R., Buitenweg, J. R. & van Gils, S. A., Oct 2015, In : Biological cybernetics. 109, 4, p. 479-491 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

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4 Citations (Scopus)
52 Downloads (Pure)

Exploiting pallidal plasticity for stimulation in Parkinson’s disease

Lourens, M. A. J., Schwab, B. C., Nirody, J. A., Meijer, H. G. E. & van Gils, S. A., Apr 2015, In : Journal of neural engineering. 12, 2, p. 026005 20 p.

Research output: Contribution to journalArticleAcademicpeer-review

8 Citations (Scopus)

Geometry of the Computational Singular Perturbation Method

Kaper, H. G., Kaper, T. J. & Zagaris, A., 22 Jun 2015, In : Mathematical modelling of natural phenomena. 10, 3, p. 16-30 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

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10 Citations (Scopus)
176 Downloads (Pure)

Introduction to Focus Issue: Nonlinear Dynamics for Planet Earth

Anderies, J. M., Kaper, H. G., Shuckburgh, E. F. & Zagaris, A., Mar 2015, In : Chaos. 25, 3, p. 036201 2 p.

Research output: Contribution to journalArticleAcademicpeer-review

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1 Citation (Scopus)
20 Downloads (Pure)

Modeling Focal Epileptic Activity in the Wilson-Cowan Model with Depolarization Block

Meijer, H. G. E., Eissa, T. L., Kiewiet, B., Neuman, J. F., Schevon, C. A., Emerson, R. G., Goodman, R. R., McKhann Jr., G. M., Marcuccilli, C. J., Tryba, A. K., Cowan, J. D., van Gils, S. A. & van Drongelen, W., 27 Mar 2015, In : Journal of mathematical neuroscience. 5, 1, p. 7 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

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18 Citations (Scopus)
60 Downloads (Pure)

Pitchfork–Hopf bifurcations in 1D neural field models with transmission delays

Dijkstra, K., van Gils, S. A., Janssens, S. G., Kouznetsov, I. A. & Visser, S., 15 Mar 2015, In : Physica D. 297, p. 88-101 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

9 Citations (Scopus)
1 Downloads (Pure)

Reconstruction and future prediction of the sea surface from radar observations

Wijaya, A. P., Naaijen, P., Andonowati, A. & van Groesen, E. W. C., 15 Sep 2015, In : Ocean engineering. 106, p. 261-270 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

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19 Citations (Scopus)
95 Downloads (Pure)

The effect of slow spatial processes on emerging spatiotemporal patterns

Doelman, A., Sewalt, L. & Zagaris, A., Mar 2015, In : Chaos. 25, 3, p. 036408 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

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3 Citations (Scopus)
33 Downloads (Pure)