Automated Co-Registration of Intra-Epoch and Inter-Epoch Series of Multispectral Uav Images for Crop Monitoring

P. O. Mc'okeyo*, F. Nex, C. Persello, A. Vrieling

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

2 Citations (Scopus)
238 Downloads (Pure)


The application of UAV-based aerial imagery has advanced exponentially in the past two decades. This can be attributed to UAV operational flexibility, ultra-high spatial resolution, inexpensiveness, and UAV-based sensors enhancement. Nonetheless, the application of multitemporal series of multispectral UAV imagery still suffers significant misregistration errors, and therefore becoming a concern for applications such as precision agriculture. Direct image georeferencing and co-registration is commonly done using ground control points; this is usually costly and time consuming. This research proposes a novel approach for automatic co-registration of multitemporal UAV imagery using intensity-based keypoints. The Speeded Up Robust Features (SURF), Binary Robust Invariant Scalable Keypoints (BRISK), Maximally Stable Extremal Regions (MSER) and KAZE algorithms, were tested and parameters optimized. Image matching performance of these algorithms informed the decision to pursue further experiments with only SURF and KAZE. Optimally parametrized SURF and KAZE algorithms obtained co-registration accuracies of 0.1 and 0.3 pixels for intra-epoch and inter-epoch images respectively. To obtain better intra-epoch co-registration accuracy, collective band processing is advised whereas one-to-one matching strategy is recommended for inter-epoch co-registration. The results were tested using a maize crop monitoring case and the; comparison of spectral response of vegetation between the UAV sensors, Parrot Sequoia and Micro MCA was performed. Due to the missing incidence sensor, spectral and radiometric calibration of Micro MCA imagery is observed to be key in achieving optimal response. Also, the cameras have different specifications and thus differ in the quality of their respective photogrammetric outputs.

Original languageEnglish
Title of host publicationISPRS Ann. Photogramm. Remote Sens. Spatial Inf. Sci
EditorsN. Paparoditis, C. Mallet, F. Lafarge, S. Hinz, R. Feitosa, M. Weinmann, B. Jutzi
PublisherInternational Society for Photogrammetry and Remote Sensing (ISPRS)
Number of pages8
Publication statusPublished - 3 Aug 2020
EventXXIVth ISPRS Congress 2020 - Virtual Event, Nice, France
Duration: 4 Jul 202010 Jul 2020
Conference number: 24

Publication series

NameISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences
ISSN (Print)2194-9042


ConferenceXXIVth ISPRS Congress 2020
Abbreviated titleISPRS 2020
Internet address


  • Co-registration
  • Image Matching
  • Inter-epoch
  • Intra-epoch
  • Multispectral
  • Orthophoto
  • Unmanned Aerial Vehicles


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