Abstract
n forced polymer translocation, the average translocation time τ scales with respect to pore force f and polymer length N as τ∼f−1Nβ. We demonstrate that an artifact in the Metropolis Monte Carlo method resulting in breakage of the force scaling with large f may be responsible for some of the controversies between different computationally obtained results and also between computational and experimental results. Using Langevin dynamics simulations we show that the scaling exponent β⩽1+ν is not universal, but depends on f. Moreover, we show that forced translocation can be described by a relatively simple force balance argument and β to arise solely from the initial polymer configuration.
Original language | English |
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Article number | 061803 |
Pages (from-to) | 1-8 |
Number of pages | 8 |
Journal | Physical Review E |
Volume | 78 |
DOIs | |
Publication status | Published - 29 Dec 2008 |
Externally published | Yes |
Keywords
- Biomembrane transport
- Differential equations
- Molecular biophysics
- Monte Carlo methods
- Nonlinear dynamical systems
- Polymers
- Stochastic processes
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