Mesh neural networks for SE(3)-equivariant hemodynamics estimation on the artery wall

Julian Suk*, Pim de Haan, Phillip Lippe, Christoph Brune, Jelmer M. Wolterink

*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

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Abstract

Computational fluid dynamics (CFD) is a valuable asset for patient-specific cardiovascular-disease diagnosis and prognosis, but its high computational demands hamper its adoption in practice. Machine-learning methods that estimate blood flow in individual patients could accelerate or replace CFD simulation to overcome these limitations. In this work, we consider the estimation of vector-valued quantities on the wall of three-dimensional geometric artery models. We employ group-equivariant graph convolution in an end-to-end SE(3)-equivariant neural network that operates directly on triangular surface meshes and makes efficient use of training data. We run experiments on a large dataset of synthetic coronary arteries and find that our method estimates directional wall shear stress (WSS) with an approximation error of 7.6% and normalised mean absolute error (NMAE) of 0.4% while up to two orders of magnitude faster than CFD. Furthermore, we show that our method is powerful enough to accurately predict transient, vector-valued WSS over the cardiac cycle while conditioned on a range of different inflow boundary conditions. These results demonstrate the potential of our proposed method as a plugin replacement for CFD in the personalised prediction of hemodynamic vector and scalar fields.
Original languageEnglish
Article number108328
Number of pages12
JournalComputers in biology and medicine
Volume173
Early online date19 Mar 2024
DOIs
Publication statusPublished - May 2024

Keywords

  • UT-Hybrid-D
  • Graph convolutional networks
  • Group-equivariance
  • Computational fluid dynamics
  • Wall shear stress
  • Coronary arteries

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