Representing Biological Systems with Multiset Rewriting

F. Martinelli; S. Bistarelli; I. Cervesato; Gabriele Lenzini; R. Marangoni

doi:10.1007/b13239

Representing Biological Systems with Multiset Rewriting

F. Martinelli, S. Bistarelli, I. Cervesato, Gabriele Lenzini, R. Marangoni

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

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Abstract

We model qualitative and quantitative aspects of metabolic pathways by using a stochastic version of Multiset Rewriting (MSR). They offer a natural way of describing both the static and the dynamic aspects of metabolic pathways. We argue that, due to its simple conceptual model, MSR may be conveniently used as an intermediate language where many higher level.

Original language	Undefined
Title of host publication	9th Int. Conf. on Computer Aided Systems Theory (EUROCAST)
Editors	R. Moreno-Diaz, F. Pichler
Place of Publication	Heidelberg
Publisher	Springer
Pages	415-426
Number of pages	12
ISBN (Print)	3-540-20221-8
DOIs	https://doi.org/10.1007/b13239
Publication status	Published - Feb 2003
Event	9th International Workshop on Computer Aided Systems Theory 2003 - Las Palmas de Gran Canaria, Spain Duration: 24 Feb 2003 → 28 Feb 2003 Conference number: 9

Publication series

Name
Publisher	Springer-Verlag, Heidelberg

Other

Other	9th International Workshop on Computer Aided Systems Theory 2003
Abbreviated title	EUROCAST 2003
Country/Territory	Spain
City	Las Palmas de Gran Canaria
Period	24/02/03 → 28/02/03

Access to Document

10.1007/b13239

Cite this

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title = "Representing Biological Systems with Multiset Rewriting",

abstract = "We model qualitative and quantitative aspects of metabolic pathways by using a stochastic version of Multiset Rewriting (MSR). They offer a natural way of describing both the static and the dynamic aspects of metabolic pathways. We argue that, due to its simple conceptual model, MSR may be conveniently used as an intermediate language where many higher level.",

author = "F. Martinelli and S. Bistarelli and I. Cervesato and Gabriele Lenzini and R. Marangoni",

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year = "2003",

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Martinelli, F, Bistarelli, S, Cervesato, I, Lenzini, G & Marangoni, R 2003, Representing Biological Systems with Multiset Rewriting. in R Moreno-Diaz & F Pichler (eds), 9th Int. Conf. on Computer Aided Systems Theory (EUROCAST). Springer, Heidelberg, pp. 415-426, 9th International Workshop on Computer Aided Systems Theory 2003, Las Palmas de Gran Canaria, Spain, 24/02/03. https://doi.org/10.1007/b13239

Representing Biological Systems with Multiset Rewriting. / Martinelli, F.; Bistarelli, S.; Cervesato, I.; Lenzini, Gabriele; Marangoni, R.

9th Int. Conf. on Computer Aided Systems Theory (EUROCAST). ed. / R. Moreno-Diaz; F. Pichler. Heidelberg : Springer, 2003. p. 415-426.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

TY - GEN

T1 - Representing Biological Systems with Multiset Rewriting

AU - Martinelli, F.

AU - Bistarelli, S.

AU - Cervesato, I.

AU - Lenzini, Gabriele

AU - Marangoni, R.

N1 - Conference code: 9

PY - 2003/2

Y1 - 2003/2

N2 - We model qualitative and quantitative aspects of metabolic pathways by using a stochastic version of Multiset Rewriting (MSR). They offer a natural way of describing both the static and the dynamic aspects of metabolic pathways. We argue that, due to its simple conceptual model, MSR may be conveniently used as an intermediate language where many higher level.

AB - We model qualitative and quantitative aspects of metabolic pathways by using a stochastic version of Multiset Rewriting (MSR). They offer a natural way of describing both the static and the dynamic aspects of metabolic pathways. We argue that, due to its simple conceptual model, MSR may be conveniently used as an intermediate language where many higher level.

U2 - 10.1007/b13239

DO - 10.1007/b13239

M3 - Conference contribution

SN - 3-540-20221-8

SP - 415

EP - 426

BT - 9th Int. Conf. on Computer Aided Systems Theory (EUROCAST)

A2 - Moreno-Diaz, R.

A2 - Pichler, F.

PB - Springer

CY - Heidelberg

Y2 - 24 February 2003 through 28 February 2003

ER -