TY - JOUR
T1 - Supervised machine learning in microfluidic impedance flow cytometry for improved particle size determination
AU - de Bruijn, Douwe
AU - ten Eikelder, Henricus
AU - Papadimitriou, Vasileios
AU - Olthuis, Wouter
AU - van den Berg, Albert
N1 - Funding Information:
This work is part of the research program of the Foundation for Fundamental Research on Matter (FOM), which is part of the Dutch Research Council (NWO) and we thank the Max Planck, Center for Complex Fluid Dynamics.
Publisher Copyright:
© 2022 The Authors. Cytometry Part A published by Wiley Periodicals LLC on behalf of International Society for Advancement of Cytometry.
PY - 2023/3
Y1 - 2023/3
N2 - The assessment of particle and cell size in electrical microfluidic flow cytometers has become common practice. Nevertheless, in flow cytometers with coplanar electrodes accurate determination of particle size is difficult, owing to the inhomogeneous electric field. Pre-defined signal templates and compensation methods have been introduced to correct for this positional dependence, but are cumbersome when dealing with irregular signal shapes. We introduce a simple and accurate post-processing method without the use of pre-defined signal templates and compensation functions using supervised machine learning. We implemented a multiple linear regression model and show an average reduction of the particle diameter variation by 37% with respect to an earlier processing method based on a feature extraction algorithm and compensation function. Furthermore, we demonstrate its application in flow cytometry by determining the size distribution of a population of small (4.6 ± 0.9 μm) and large (5.9 ± 0.8 μm) yeast cells. The improved performance of this coplanar, two electrode chip enables precise cell size determination in easy to fabricate impedance flow cytometers.
AB - The assessment of particle and cell size in electrical microfluidic flow cytometers has become common practice. Nevertheless, in flow cytometers with coplanar electrodes accurate determination of particle size is difficult, owing to the inhomogeneous electric field. Pre-defined signal templates and compensation methods have been introduced to correct for this positional dependence, but are cumbersome when dealing with irregular signal shapes. We introduce a simple and accurate post-processing method without the use of pre-defined signal templates and compensation functions using supervised machine learning. We implemented a multiple linear regression model and show an average reduction of the particle diameter variation by 37% with respect to an earlier processing method based on a feature extraction algorithm and compensation function. Furthermore, we demonstrate its application in flow cytometry by determining the size distribution of a population of small (4.6 ± 0.9 μm) and large (5.9 ± 0.8 μm) yeast cells. The improved performance of this coplanar, two electrode chip enables precise cell size determination in easy to fabricate impedance flow cytometers.
KW - UT-Hybrid-D
U2 - 10.1002/cyto.a.24679
DO - 10.1002/cyto.a.24679
M3 - Article
SN - 1552-4922
VL - 103
SP - 221
EP - 226
JO - Cytometry. Part A
JF - Cytometry. Part A
IS - 3
ER -